Re: Does ASReml-R work with R-2.9.0?

> david.butler Posted: Tue May 26, 2009 7:28 pm
> On behalf of Dean Diepeveen:
>
> =============
> Xianming, others,
> I have hardware with this combination of software (Ubuntu 9.04, Centos
> 5.3 with R2.9.0) and it works a treat.
I'm still confused. Is that saying BOTH Ubuntu and CentOS work? I have CentOS 5.2 which allows asrem-R to work fine with R2.8.1, but not with 2.9.0 but it appears that Xianming's problem with Ubuntu 9.04 and R 2.8.1. I don't know whether Xianming has it working with any other setup.
> Check out the documentation that comes with it (ie
> http://www.austatgen.org/files/software/asreml/asreml-SRinstall.html) .
> I have set mine up with an asreml.conf file in the directory /etc/ld.so.conf.d. containing the locations of the asreml libraries.
> Remember to run ldconfig once done.
I see you have the luxury of having root access which I don't have. Obviously, I also can't check to see if the problem disappears with CentOS 5.3 but that fact might get us closer to working out how the problem arises. With both the Fedora 8 and Mepis installations I've checked I have root access. However, I still set the LD_LIBRARY_PATH in the user directory, so I'm still not convinced that is the issue since they work there, even with R-2.9.0.

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Received on Thu May 27 2009 - 05:31:07 EST