Re: Two trait animal model

From: Rami Sawalha <rami_at_BIGRED.UNL.EDU>
Date: Tue, 14 Dec 2004 18:06:56 -0600

Thank you. The problem was solved when I upgraded to 1.1 release.
Rami Sawalha

----- Original Message -----
From: "Arthur Gilmour" <arthur.gilmour_at_agric.nsw.gov.au>
To: <ASREML-L_at_agric.nsw.gov.au>
Sent: Tuesday, December 14, 2004 5:17 PM
Subject: Re: Two trait animal model

> Dear Rami,
>
> The problem you refer to is a bug in the initial commercial release of
> ASReml 1.00
>
> You need to upgrade to ASReml 1.10f which can be done from the website
> or by contacting VSN. The version number is displayed at the top of the
> .asr file
> and should be quoted when reporting an error.
>
> I strongly suggest anyone who is using the original release, upgrade to
> 1.10f
>
>
> Best wishes for Christmas 2005.
> Remember the Reason for the Season is God's gift:
> Jesus Christ was born that He might 'taste death for every man'
>
>
>
>
> Arthur Gilmour PhD
> Principal Research Scientist (Biometrics)
> NSW Department of Primary Industries
> Orange Agricultural Institute, Forest Rd, ORANGE, 2800, AUSTRALIA
>
> mailto:Arthur.Gilmour_at_agric.nsw.gov.au
> fax: 02 6391 3899; 02 6391 3922 Australia +61
> telephone work: 02 6391 3815; home: 02 6364 3288;
> mobile: 04 2764 3288 (no reception at home)
> http://www.agric.nsw.gov.au/reader/17263
>
> ASREML website: http://www.asreml.co.uk/
> The ASReml discussion group ASREML-L_at_agric.nsw.gov.au
> has reactivated. To join, mailto:arthur.gilmour_at_agric.nsw.gov.au
>
> Cookbook: http://uncronopio.org/luis/asreml_cookbook.html
> <> <> <> <> <> <> <>
>
> <><><><><><><><><><><><><><><><><><><><><><><><><>
>
>
>
>
> Rami Sawalha <rami_at_bigred.unl.edu>
> Sent by: ASReml users discussion group <ASREML-L_at_AGRIC.NSW.GOV.AU>
> 15/04/2004 01:29 AM
> Please respond to Rami Sawalha
>
>
> To: ASREML-L_at_AGRIC.NSW.GOV.AU
> cc:
> Subject: Two trait animal model
>
>
> Dear ASREMLers;<?xml:namespace prefix = o ns =
> "urn:schemas-microsoft-com:office:office"
> />
> I am trying to run a two trait animal model. I am having trouble in
> fitting different fixed factors for each of the traits. I tried to specify
> that by using: at(Trait,1).Factor1 at(Trait,2)Factor2 in the model
> statement. However, I am getting an error message indicating fault in
> reading the model terms at(Tr,1)Factors. The program will run fine if the
> same factors were fitted for all traits. Any idea how to fit and specify
> different factors for different traits in multiple trait analyses.
> The as program that I am trying to run is:
>
> Two trt MS 02 1 and 2
> ANM !P
> SIRE !I
> DAM !I
> YR1 !I
> YR2 !I
> MS1
> MS2
> 02_1_2.TXT !MAKE #!REPEAT
> 02_1_2.TXT !MVINCLUDE # !REPORT !MAXIT 1000
> MS1 MS2 ~ Trait at(Tr,1).YR1 at(Tr,2).YR2 !r Tr.ANM # !f mv
> 1 2 1
> 0 0 ID
> 2 0 US #.02 .02 .03 !GP
> 3 * 0 !GP
> Tr.ANM 2
> 2 0 US .01 .07 .04 !GP
> ANM 0 AINV
>
>
> And the message I get in .asr file is:
> <?xml:namespace prefix = st1 ns =
> "urn:schemas-microsoft-com:office:smarttags" />Reading pedigree file
> 02_1_2.TXT : skipping 0 lines
> PEDIGREE [02_1_2.TXT ] has 1551 identities, 4558 Non zero elements
> QUALIFIERS: !MVINCLUDE
> Reading 02_1_2.TXT FREE FORMAT skipping 0 lines
> Invalid definition for model term at(Tr,1)
> 1 is outside [0, 2]
> Fault 0 Error reading model factor list
> Last line read was: MS1 MS2 Trait at(Tr,1).YR1 at(Tr,2).YR2 !r
> Tr.ANM
>
>
> Any Clue ... Thanks
> Rami Sawalha
> Ph.D. University of Nebraska-Lincoln
>
>
>
>
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Received on Tue Dec 14 2004 - 18:06:56 EST

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