Re: Problem with a second .grm file

From: Arthur Gilmour <arthur.gilmour_at_CARGOVALE.COM.AU>
Date: Wed, 28 Oct 2009 09:50:49 +1100

Dear Marcelo,

1) Let's try something simple first.

  Increase the WORKSPACE
i.e. insert a new line at the top of the .as file which says (say)


and rerun the job.

2) If that results in it failing at exactly the same point,
it suggests a problem with the file. But you could swap the order of
the .grm files and see whether that makes a difference.

3) Third option is to use ASReml 3 (from
if not available yet from VSN)

4) If all else fails, send me ( the job
(all data, as ped and grm files)

On Tue, 2009-10-27 at 13:28 +0000, Marcelo Viana wrote:
> My problem is that ASReml cannot read a second .grm file (associated
> with dominance effect). The message is in the output bellow. There is
> no problem with the file since it is read when I define it as the A
> matrix (associated with the pedigree). The file is equivalent to a
> matrix of 1535 x 1535 (see ASReml code bellow). When the file has
> fewer dimensions it is read without problem (791 x 791). Thanks.
> ASReml 2.00a [01 Jul 2006] BLUP analysis, half- and full-sib families
> cycles 1 and 2
> Build: v [27 Feb 2007] 32 bit
> 26 Oct 2009 20:38:30.437 32.00 Mbyte Windows rphsfsc12

Best Wishes,
Arthur Gilmour
Adjunct Professor
School of Computing and Mathematics
Charles Sturt University
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Received on Thu Oct 28 2009 - 09:50:49 EST

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