Hello:
My problem is that ASReml cannot read a second .grm file (associated with dominance effect). The message is in the output bellow. There is no problem with the file since it is read when I define it as the A matrix (associated with the pedigree). The file is equivalent to a matrix of 1535 x 1535 (see ASReml code bellow). When the file has fewer dimensions it is read without problem (791 x 791). Thanks.
ASReml 2.00a [01 Jul 2006] BLUP analysis, half- and full-sib families cycles 1 and 2
Build: v [27 Feb 2007] 32 bit
26 Oct 2009 20:38:30.437 32.00 Mbyte Windows rphsfsc12
Licensed to: Universidade Federal de Viçosa
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* SYNTAX change: A/B now means A A.B *
* *
* Contact support_at_asreml.co.uk for licensing and support *
***************************************************** ARG *
Folder: C:\Documents and Settings\José Marcelo\Meus documentos\My ASReml Files
a 1535 !p
Reading pedigree file rphsfsc12ped.txt : skipping 0 lines
Using an adapted version of Meuwissen & Luo GSE 1992 305-313: Specify !METHOD 1 for column method.
PEDIGREE [rphsfsc12ped.txt ] has 1595 identities, 3897 Non zero elements
Reading rphsfsc12A.grm skipping 0 header lines
Inverse G structure of 1535 rows obtained by inverting matrix read from rphsfsc12A.grm
Reading rphsfsc12D.grm skipping 0 header lines
After 411778 lines: something wrong reading rphsfsc12D.grm
In row 908 read line 908 0 1.0000
Space use 1187373 1599151 1600000
Fault 0 Error reading rphsfsc12D.grm
Last line read was: rphsfsc12D.grm
Currently defined structures, COLS and LEVELS
1 a 1 -1 0 0 0 0
2 d 1 1535 0 0 0 0
3 pop 1 2 0 0 0 0
4 env 1 4 0 0 0 0
5 ev 1 1 0 0 0 0
6 y 1 1 0 0 0 0
rphsfsc12 rphsfsc12D.grm
6 factors defined [max 500].
0 variance parameters [max1500]. 3 special structures
Last line read was: rphsfsc12D.grm
6 0 -1 0 4000
Finished: 26 Oct 2009 20:38:38.390 Error reading rphsfsc12D.grm
ASReml CODE:
BLUP analysis, half- and full-sib families cycles 1 and 2
a 1535 !p
d 1535
pop 2
env 4
ev y
rphsfsc12ped.txt !make
rphsfsc12A.grm
rphsfsc12D.grm
rphsfsc12.asd
!continue
!maxit 30
!ddf
ev ~ mu pop env !r a d
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Received on Wed Oct 27 2009 - 13:28:42 EST
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