true BLUP
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true BLUP
Dear asremlrs,
Sorry to return to the TRUE BLUP problem.
I am trying to run true BLUP in a simulated data set.
I tried the option !maxit, but the final variance components are different
from my priors (Analysis 1, below).
Then I tried to add the option !GF, which was supposed to keep fixed the
variance components. Again, the estimates of the variance components are
different from my priors (Analysis 2, below).
Could somebody help me solve this?
Thanks
Uilson Lopes
====================================
.as file
True BLUP
env 2 # environments
fam 80 # families
blk 12 # blocks
x1
/f/share/uvl/CHAP3/BLUPtrue/CH3e.dat !maxit 1
x1 ~ mu blk env !r fam 0.0013468 fam.env 0.052304 blk.fam 0.11188 # !GF
1 1 0
0 !S2==0.012249 # !GF
======================================================
ANALYSIS 1. NO !GF option
LogL=-285885. S2= 0.1225E-01 9588 df 0.00135 0.05230 0.11188
0.01225
Final parameter values 0.00549 0.06940 0.14017
0.01225
Source Model terms Gamma Component Compnt/StndErr
fam 80 80 0.549387E-02 0.549387E-02 0.84
fam.env 160 160 0.694019E-01 0.694019E-01 7.33
blk.fam 960 960 0.140167 0.140167 28.44
Variance 9600 9588 0.122490E-01 0.122490E-01 0.00
=====================================================
ANALYSIS 2. WITH !GF option
LogL=-285885. S2= 0.1225E-01 9588 df 0.00135 0.05230 0.11188
0.01225
Final parameter values 0.00549 0.07412 0.11188
0.01225
Source Model terms Gamma Component Compnt/StndErr
fam 80 80 0.549387E-02 0.549387E-02 0.84
fam.env 160 160 0.741164E-01 0.741164E-01 7.86
blk.fam 960 960 0.111880 0.111880 0.00
Variance 9600 9588 0.122490E-01 0.122490E-01 0.00
============================================================