Local maximum LogL II (asr)
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Local maximum LogL II (asr)
Here's the entire asr files.
Hermann
-----------------
ASREML [16 Feb 2000]
20 Jul 2000 18:38:41.470 128.00 Mbyte MSWIN C:\ASREML-Win\Razas\h1
***************************************************
* ASREML 2000 Residuals now written to .yht file *
********************************************* ARG *
Reading pedigree file C:\asreml-win\razas\pedigreegg.txt : skipping
1 lines
Pedigree check: G1 G1 occurs as Sire and Dam: Line
10 2 3 1 10
Pedigree check: G7 G7 occurs as Sire and Dam: Line
23 2 3 2 23
Pedigree check: G4 G4 occurs as Sire and Dam: Line
25 2 3 3 25
Pedigree check: G19 G19 occurs as Sire and Dam: Line
31 2 3 4 31
Pedigree check: G11 G11 occurs as Sire and Dam: Line
32 2 3 5 32
Pedigree check: G12 G12 occurs as Sire and Dam: Line
35 2 3 6 35
Pedigree check: G18 G18 occurs as Sire and Dam: Line
37 2 3 7 37
Pedigree check: G14 G14 occurs as Sire and Dam: Line
38 2 3 8 38
Pedigree check: G15 G15 occurs as Sire and Dam: Line
41 2 3 9 41
PEDIGREE [C:\asreml-win\razas\pedigreegg.txt ] has 1528
identities, 4526 Non zero elements
QUALIFIERS: !skip 1 !maxit 20
Reading C:\asreml-win\razas\final5%areabasal.txt FREE FORMAT
skipping 1 lines
Univariate analysis of h1
Using 852 records [of 1479 read from 1479 lines of
C:\asreml-win\razas\]
Model term Size Type COL Minimum Mean Maximum
#zero #miss
1 arbol 1528 Direct 1 50.00 763.4 1502.
0 0
2 numblo 9 Factor 2 1 4.7547 9
0 0
WARNING - Fewer levels found in fami than specified
3 fami 44 Factor 3 1 20.2383 37
0 0
WARNING - Fewer levels found in procede than specified
4 procede 6 Factor 4 1 2.7113 5
0 0
5 raza 19 Factor 5 1 8.4824 19
0 0
6 h1 1 Variate 6 10.60 20.53 30.30
0 0
7 h2 1 Covariat 7 0.000 0.000 0.000
0 852
8 dap1 1 Covariat 8 10.80 16.59 30.70
0 0
9 dap2 1 Covariat 9 0.000 0.000 0.000
0 852
10 vol1 1 Covariat 10 0.3020E-01 0.1651 0.7066
0 0
11 vol2 1 Covariat 11 0.000 0.000 0.000
0 852
12 recti1 1 Covariat 12 1.000 2.218 4.000
0 0
13 recti2 1 Covariat 13 0.1000E+25 0.000 -0.1000E+25
0 852
14 mu 1 Constant Term
15 numblo.proce 54 Interaction 2 numblo : 9 4 procede
: 6
16 numblo.fami 396 Interaction 2 numblo : 9 3 fami
: 44
Forming 1988 equations: 64 dense
Initial updates will be shrunk by factor 0.387
NOTICE: 131 (more) singularities,
LogL=-1177.45 S2= 5.1233 802 df 0.1000 0.1000
1.000
LogL=-1177.60 S2= 4.9262 802 df 0.1277 0.1299
1.000
LogL=-1178.34 S2= 4.6714 802 df 0.1730 0.1699
1.000
LogL=-1179.18 S2= 4.4919 802 df 0.2145 0.1949
1.000
LogL=-1179.47 S2= 4.4425 802 df 0.2288 0.1993
1.000
LogL=-1179.50 S2= 4.4371 802 df 0.2305 0.1996
1.000
LogL=-1179.50 S2= 4.4366 802 df 0.2306 0.1996
1.000
Final parameter values 0.23066 0.19958
1.0000
Source Model terms Gamma Component Comp/SE
% C
arbol 1528 1528 0.230658 1.02335 1.44
0 U
numblo.fami 396 288 0.199582 0.885474 3.19
0 U
Variance 852 802 1.00000 4.43665 7.15
0 P
Analysis of Variance DF F-incr F-adj StndErrDiff
2 numblo 8 14.43 6.95 0.7820
15 numblo.procede 33 2.48 2.48
Solution Standard Error T-value T-prev
15 numblo.procede
5 -0.252072 1.07011 -0.24
8 -2.23923 1.20913 -1.85
9 2.11020 1.14213 1.85 3.42
10 1.49756 1.17184 1.28 -0.50
11 1.75740 1.36248 1.29 0.24
14 0.123007 1.34127 0.09
15 2.51157 1.17676 2.13 1.71
16 1.88314 1.21607 1.55 -0.49
17 1.61655 1.43088 1.13 -0.22
20 -0.618397E-01 1.21548 -0.05
21 2.40502 1.14979 2.09 1.93
22 1.19633 1.24005 0.96 -0.93
23 0.775220 1.28579 0.60 -0.39
26 -0.756480 1.24640 -0.61
27 1.12014 1.19170 0.94 1.41
28 -0.737107 1.29164 -0.57 -1.35
29 1.64578 1.38405 1.19 1.94
32 -4.10412 1.28773 -3.19
33 -2.43766 1.22494 -1.99 1.25
34 -0.528455 1.28103 -0.41 1.44
35 -4.66286 1.36500 -3.42 -3.69
38 -0.690368 1.37038 -0.50
39 1.01421 1.22725 0.83 1.21
40 0.478207 1.23964 0.39 -0.42
41 -0.427438 1.39825 -0.31 -0.81
44 -0.700923 1.22871 -0.57
45 0.748687 1.14188 0.66 1.12
46 0.338566E-01 1.30233 0.03 -0.52
47 -2.36772 1.58570 -1.49 -1.62
50 0.124300 1.42215 0.09
51 -0.359369 1.18767 -0.30 -0.33
52 2.41619 1.28881 1.87 2.05
53 0.737328 1.57770 0.47 -1.17
2 numblo
56 -2.43397 0.757360 -3.21
57 0.277493E-01 0.783276 0.04 3.26
58 -1.09307 0.761101 -1.44 -1.48
59 -2.94794 0.776243 -3.80 -2.48
60 2.15960 0.830230 2.60 6.28
61 -1.24121 0.832147 -1.49 -3.91
62 -0.522204 0.749901 -0.70 0.91
63 -1.27772 0.785096 -1.63 -1.01
1 arbol 1528 effects fitted
16 numblo.fami 288 effects fitted
SLOPES FOR LOG(ABS(RES)) on LOG(PV) for Section 1
3.10
5 possible outliers: see .res file
Finished: 20 Jul 2000 18:39:39.200 LogL Converged
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