Re: Does ASReml-R work with R-2.9.0?

From: Butler, David <David.Butler_at_DPI.QLD.GOV.AU>
Date: Wed, 6 May 2009 16:09:39 +1000

Dear kiwi, It looks as though the dynamic linker is not finding the asreml dependencies. Depending on your installation, check either the setting of the environment variable LD_LIBRARY_PATH or the path in /etc/ and make sure that which ever of these you have used points to the package sub-directory ('libs') containing the asreml shared object (.so) files. Dave. ________________________________ From: ASReml users discussion group [] On Behalf Of kiwi Sent: Wednesday, 6 May 2009 9:33 AM To: Subject: Does ASReml-R work with R-2.9.0? It would appear from my recent experience that R-2.9.0 does something different that is incompatible with the way the asreml package looks for the executable. Code: > require(asreml) Loading required package: asreml Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '$Rhome/asreml/libs/': cannot open shared object file: No such file or directory (Note that Code: $Rhome is not literally what's in the message.) Has anyone used R-2.9.0 with asreml? Code: > sessionInfo() R version 2.9.0 (2009-04-17) i686-pc-linux-gnu locale: LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.U TF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME= C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATI ON=C attached base packages: [1] grDevices utils stats graphics methods base other attached packages: [1] lattice_0.17-22 loaded via a namespace (and not attached): [1] grid_2.9.0 > Reverting to R-2.8.1 avoids the problem, but that's not a satisfactory solution.. -------------------- m2f -------------------- Sent using Mail2Forum ( Read this topic online here: -------------------- m2f -------------------- This message is intended for the addressee named and may contain confidential information. If you are not the intended recipient, please delete it and notify the sender. Views expressed in this message are those of the individual sender, and are not necessarily the views of their organisation. ********************************DISCLAIMER**************************** The information contained in the above e-mail message or messages (which includes any attachments) is confidential and may be legally privileged. It is intended only for the use of the person or entity to which it is addressed. If you are not the addressee any form of disclosure, copying, modification, distribution or any action taken or omitted in reliance on the information is unauthorised. Opinions contained in the message(s) do not necessarily reflect the opinions of the Queensland Government and its authorities. If you received this communication in error, please notify the sender immediately and delete it from your computer system network.
Received on Thu May 06 2009 - 16:09:39 EST

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