Re: Analysis of Microarray Data using ASReml

From: Bruce Southey <southey_at_UIUC.EDU>
Date: Thu, 21 Oct 2004 16:09:22 -0500

Could you suggest what the possible solution for this error?

I presume it is memory related and one factor with 8000 levels only because of
what I did next.

I shorted the data file and got it to work with about 402,000 lines out of the
700,000 lines - about 5000 levels.
Treating the factor a covariate allows the full data to be read in but that is
not a solution.

It would be nice to be able to override the default levels for a factor if
that is the limitation.


jwe0019i-u The program was terminated abnormally with signal number SIGSEGV.

 Error occurs at or near line 785 of newalpha_
 Called from or near line 239 of rddata_
 Called from or near line 1659 of aidata_
 Called from or near line 52 of MAIN__
error summary (Fortran)
error number error level error count
  jwe0019i u 1
total error count = 1
Received on Thu Oct 21 2004 - 16:09:22 EST

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