Re: pedigree too big

From: Bruce Southey <southey_at_UIUC.EDU>
Date: Thu, 14 Oct 2004 11:32:34 -0500

Hi,
Assuming you have sufficient memory available, you need to run it with -Ss as
indicated. For example
asreml -S2

is 256MB memory.

Regards
Bruce

---- Original message ----
>Date: Thu, 14 Oct 2004 16:51:57 +0200
>From: Nicola Macciotta <macciott_at_UNISS.IT>
>Subject: pedigree too big
>To: ASREML-L_at_AGRIC.NSW.GOV.AU
>
>Dear all,
>I am working on a univariate genetic analysis Animal Model . The pedigree
>file contains about 110.000 animals.
>This is the program:
>
>matr !p !A
> allev !A
> parity 6
> lattey
> N
> DIFF
> yearparto !A
> seaparto 6
> factor1
> factor2
>pedcharok2.ped !skip1 !ALPHA
>fatcharn.txt !skip1
>factor2 ~ mu allev parity yearparto seaparto !r matr ide(matr)
>-S6
>
>
>
>The program stops and in the primary output file tells
>
>maxPED= 307692, Individual 6 of 100894
> Maybe increase MEMORY (-Ss) option or verify pedigree file
> Fault 6 Error when processing pedigree file
>
>Can anybody help me?
>
>Thanks.
>
>Nicolo
>
>
>I have used the
>
>Nicol˛ P.P. Macciotta
>Dipartimento di Scienze Zootecniche
>UniversitÓ degli Studi di Sassari
>Via De Nicola, 9
>07100 Sassari, Italia
>tel 39.079.229298 fax 39.079.229302
>e-mail macciott_at_uniss.it
Received on Thu Oct 14 2004 - 11:32:34 EST

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